• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr9255 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9255" - Elongation of fatty acids protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9255Elongation of fatty acids protein (278 aa)    
Predicted Functional Partners:
Phatr25360
Short-chain dehydrogenase/reductase acting with NAD or NADP as acceptor; Belongs to the short-chain dehydrogenases/reductases (SDR) family (327 aa)
     
  0.918
PTD9
Desaturase delta 9 desaturase; Belongs to the fatty acid desaturase type 1 family (333 aa)
     
 
  0.613
Phatr14294
Predicted protein (213 aa)
           
  0.578
RNAse-H
Predicted protein (190 aa)
           
  0.556
Phatr20677
Predicted protein (236 aa)
     
 
  0.506
Phatr10213
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (182 aa)
     
 
  0.506
Act2
Actin/actin like protein; Actin; Belongs to the actin family (377 aa)
       
 
  0.474
Phatr46586
Predicted protein (514 aa)
     
 
  0.412
Phatr44831
Predicted protein (747 aa)
     
 
  0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (13%) [HD]