STRINGSTRING
Phatr9266 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9266" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9266Predicted protein (224 aa)    
Predicted Functional Partners:
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
  0.834
Phatr13382
Predicted protein (244 aa)
   
      0.771
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
 
  0.690
Phatr50084
Predicted protein (260 aa)
   
 
  0.654
Phatr14785
Predicted protein (176 aa)
   
 
  0.654
GLXI
Lactyolglutathione lyase (310 aa)
     
 
  0.626
Phatr47293
Predicted protein (580 aa)
     
    0.600
Phatr38534
Predicted protein (204 aa)
     
      0.510
Phatr22388
Peroxiredoxin (233 aa)
     
      0.510
Phatr14898
Predicted protein (139 aa)
     
      0.510
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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