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STRINGSTRING
Phatr9283 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9283" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9283Predicted protein (623 aa)    
Predicted Functional Partners:
LUT1-1
Lutein deficient 1-like protein; Lut1-1; Belongs to the cytochrome P450 family (538 aa)
   
 
  0.905
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.824
Phatr9538
Predicted protein (593 aa)
 
  0.753
Phatr12902
Predicted protein (536 aa)
   
 
  0.605
Phatr42282
Predicted protein (383 aa)
   
   
  0.579
Phatr19901
Predicted protein (900 aa)
   
   
  0.537
Phatr7755
Predicted protein (88 aa)
   
   
  0.526
Phatr12925
Predicted protein; Belongs to the precorrin methyltransferase family (255 aa)
 
   
  0.487
Phatr31339
Predicted protein; Belongs to the cytochrome P450 family (482 aa)
 
 
  0.457
Phatr46438
Predicted protein (565 aa)
   
 
  0.457
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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