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STRINGSTRING
Phatr9344 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9344" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9344Predicted protein (389 aa)    
Predicted Functional Partners:
MCM5
Predicted protein; Belongs to the MCM family (667 aa)
     
 
  0.999
MCM3
Predicted protein; Belongs to the MCM family (551 aa)
     
 
  0.998
MCM4
DNA helicase; Belongs to the MCM family (791 aa)
     
 
  0.998
MCM7
Predicted protein; Belongs to the MCM family (618 aa)
     
 
  0.998
Phatr32848
Predicted protein (685 aa)
     
 
  0.997
Phatr45115
Predicted protein (1834 aa)
     
 
  0.994
Phatr40942
Predicted protein (235 aa)
     
 
  0.990
Phatr1690
Predicted protein (495 aa)
     
   
  0.988
POLA
DNA polymerase (1147 aa)
     
 
  0.985
CDC6
Predicted protein (1107 aa)
     
 
  0.983
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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