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STRINGSTRING
Phatr9348 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9348" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9348Predicted protein (172 aa)    
Predicted Functional Partners:
Phatr1690
Predicted protein (495 aa)
   
  0.997
PHATR_7646
Predicted protein (137 aa)
   
 
  0.976
Phatr46855
Predicted protein (245 aa)
     
 
  0.969
Phatrdraft1367
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (245 aa)
     
  0.901
Phatr6457
Predicted protein; Belongs to the adenylate kinase family (196 aa)
     
  0.901
Phatr2087
Predicted protein; Thymidylate synthase (217 aa)
   
 
  0.825
Phatr12373
Predicted protein (224 aa)
   
   
  0.793
RFC4
Predicted protein (350 aa)
     
   
  0.664
Phatr13725
Predicted protein (397 aa)
       
  0.642
Phatr43326
Predicted protein (349 aa)
   
 
  0.599
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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