STRINGSTRING
Phatr9372 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9372" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9372Predicted protein (504 aa)    
Predicted Functional Partners:
Phatr26176
Predicted protein (408 aa)
     
 
  0.704
Phatr23324
Predicted protein (176 aa)
   
      0.611
Phatr12292
50S ribosomal protein L33 (57 aa)
     
 
  0.578
Phatr44942
Predicted protein (556 aa)
 
 
 
  0.569
Phatr44242
Predicted protein (890 aa)
     
      0.552
Phatr28359
Predicted protein (229 aa)
     
 
  0.549
Phatr14915
Predicted protein (200 aa)
     
 
  0.549
Phatr49748
Predicted protein (2821 aa)
     
 
  0.548
Phatr29097
Predicted protein (225 aa)
   
      0.458
Phatr42307
Predicted protein (453 aa)
     
    0.448
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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