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Phatr9411 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9411" - 30S ribosomal protein S15 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr941130S ribosomal protein S15 (78 aa)    
Predicted Functional Partners:
Phatr33660
Predicted protein (253 aa)
   
  0.995
Phatr9894
Predicted protein (140 aa)
   
  0.993
Phatr31919
Predicted protein (305 aa)
   
  0.992
Phatr19615
Predicted protein (121 aa)
     
  0.991
Phatr29097
Predicted protein (225 aa)
   
  0.991
Phatr17545
Predicted protein (261 aa)
   
  0.986
Phatr51291
Predicted protein (121 aa)
   
  0.984
Phatr19103
Predicted protein (102 aa)
   
  0.982
Phatr23691
Predicted protein (130 aa)
   
  0.981
Phatr13682
Predicted protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (220 aa)
   
  0.981
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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