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STRINGSTRING
Phatr9413 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9413" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9413Predicted protein; Belongs to the protein kinase superfamily (325 aa)    
Predicted Functional Partners:
Phatr3120
Predicted protein (241 aa)
 
 
 
  0.767
Phatr5235
Predicted protein (263 aa)
 
 
 
  0.765
Phatr12655
Predicted protein (260 aa)
 
 
 
  0.765
Phatr11563
Predicted protein (238 aa)
 
 
 
  0.765
Phatr10848
Predicted protein (261 aa)
 
 
 
  0.765
hCDK7
Mitogen-activated protein kinase (358 aa)
   
 
  0.762
Phatr36721
Predicted protein (323 aa)
     
 
  0.755
Phatr38549
Predicted protein (1128 aa)
     
 
  0.740
Phatr36270
Predicted protein (1987 aa)
     
 
  0.740
Ras1
Predicted protein (191 aa)
     
 
  0.721
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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