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Phatr9491 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9491" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9491Predicted protein (163 aa)    
Predicted Functional Partners:
Phatr2845
Predicted protein (268 aa)
   
 
0.970
hCDK1
Predicted protein (380 aa)
   
0.969
hCDK7
Predicted protein (358 aa)
   
0.968
Ras1
Predicted protein (191 aa)
       
  0.848
Phatr47992
Predicted protein (432 aa)
     
  0.839
Phatr4563
Predicted protein (275 aa)
   
 
  0.750
Phatrdraft434
Predicted protein (245 aa)
   
 
  0.747
Phatrdraft137
Predicted protein (245 aa)
   
 
  0.747
Phatr44306
Predicted protein (865 aa)
     
  0.745
Phatr7634
Predicted protein (103 aa)
       
 
  0.743
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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