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STRINGSTRING
Phatr9576 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9576" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9576Predicted protein (254 aa)    
Predicted Functional Partners:
Phatr54813
Predicted protein (322 aa)
     
 
  0.994
Phatr9231
Predicted protein (107 aa)
       
 
  0.992
Phatr43176
Predicted protein (464 aa)
     
 
  0.969
Phatr10102
Predicted protein (214 aa)
     
 
  0.956
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
     
 
  0.942
Phatr18735
Predicted protein (442 aa)
     
 
  0.917
Phatr10354
Predicted protein (653 aa)
     
 
  0.917
Phatr46257
Predicted protein (238 aa)
     
 
  0.915
Phatr46460
Predicted protein (1448 aa)
     
   
  0.883
Phatr11337
Predicted protein (319 aa)
     
 
  0.875
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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