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STRINGSTRING
Phatr9601 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9601" - Protein of f-actin capping protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9601Protein of f-actin capping protein (214 aa)    
Predicted Functional Partners:
Phatr35252
F-actin capping protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments (205 aa)
     
 
  0.995
Phatr15613
Predicted protein; Belongs to the actin-binding proteins ADF family (123 aa)
     
 
  0.903
Phatr45580
Coronin like protein; Belongs to the WD repeat coronin family (450 aa)
       
 
  0.847
Phatr47725
Predicted protein (1097 aa)
     
 
  0.818
Phatr48381
Predicted protein (715 aa)
     
 
  0.786
ACT1
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
     
 
  0.741
ARP1
Actin related protein; Belongs to the actin family (391 aa)
     
 
  0.741
Phatr29812
Actin/actin like proteinPredicted protein; Belongs to the actin family (377 aa)
     
 
  0.741
Act2
Actin/actin like protein; Actin; Belongs to the actin family (377 aa)
     
 
  0.741
Phatr32733
Predicted protein (586 aa)
     
 
  0.624
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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