STRINGSTRING
Phatr9601 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9601" - Protein of f-actin capping protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9601Protein of f-actin capping protein (214 aa)    
Predicted Functional Partners:
Phatr51157
Actin/actin like proteinPredicted protein (377 aa)
     
 
  0.857
ARP1
Actin related protein (391 aa)
     
 
  0.857
ACT1
Actin/actin like proteinPredicted protein (377 aa)
     
 
  0.857
Act2
Actin (377 aa)
     
 
  0.857
Phatr15613
Predicted protein (123 aa)
     
 
  0.775
Phatr48381
Predicted protein (715 aa)
     
 
  0.685
Phatr45153
Predicted protein (523 aa)
     
 
  0.654
ARP
Actin related protein (463 aa)
     
 
  0.654
Phatr21122
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
      0.613
Phatrdraft7
Predicted protein (721 aa)
       
 
  0.580
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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