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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr9639 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9639" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9639Predicted protein (545 aa)    
Predicted Functional Partners:
Phatr11720
Predicted protein (69 aa)
     
 
  0.972
Phatr43088
Predicted protein (1279 aa)
     
 
  0.899
Phatr23224
Predicted protein (710 aa)
     
 
  0.899
Phatr50076
Predicted protein; Belongs to the protein-tyrosine phosphatase family. Non-receptor class myotubularin subfamily (1027 aa)
     
   
  0.888
Phatr46058
Formin like protein (2015 aa)
     
   
  0.791
Phatr46588
Predicted protein (1225 aa)
     
   
  0.749
Phatr30282
Predicted protein; Belongs to the PI3/PI4-kinase family (341 aa)
     
 
  0.655
Phatr15031
Predicted protein; Belongs to the PI3/PI4-kinase family (118 aa)
     
 
  0.655
Phatr47275
Predicted protein (1055 aa)
     
   
  0.646
Phatr44037
Predicted protein (1291 aa)
     
   
  0.621
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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