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Phatr9639 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9639" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9639Predicted protein (545 aa)    
Predicted Functional Partners:
Phatr43088
Predicted protein (1279 aa)
     
  0.890
Phatr23224
Predicted protein (710 aa)
     
  0.890
Phatr11720
Predicted protein (69 aa)
     
  0.874
Phatr573
Predicted protein (665 aa)
 
 
  0.585
Phatr44344
Predicted protein (980 aa)
     
  0.585
Phatr43917
Predicted protein (784 aa)
     
  0.585
Phatr27923
Predicted protein (623 aa)
     
      0.579
Phatr49524
Predicted protein (926 aa)
     
  0.558
Phatr47389
Predicted protein (591 aa)
     
  0.558
Phatr54789
Predicted protein (1205 aa)
     
  0.540
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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