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Phatr9697 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9697" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9697Predicted protein (153 aa)    
Predicted Functional Partners:
Phatr48728
Predicted protein (192 aa)
     
 
  0.999
Phatr8185
Predicted protein (100 aa)
     
        0.958
Phatr21073
Predicted protein (110 aa)
     
        0.791
Phatr46735
Predicted protein (163 aa)
     
        0.741
Phatr27125
Predicted protein (115 aa)
     
      0.723
Phatr17414
40S ribosomal protein S8 (205 aa)
     
      0.715
Phatr23324
Predicted protein (176 aa)
     
      0.708
Phatr25714
Ribosomal protein L15 (205 aa)
     
      0.689
Phatr33660
Predicted protein (253 aa)
     
   
  0.687
Phatr25577
Predicted protein (133 aa)
     
        0.685
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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