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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr9706 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9706" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9706Predicted protein (169 aa)    
Predicted Functional Partners:
Phatr6258
Predicted protein (205 aa)
     
   
  0.818
Phatr31725
Predicted protein (629 aa)
     
   
  0.812
Phatr42302
Predicted protein (289 aa)
     
   
  0.809
Phatr37596
Predicted protein (531 aa)
     
   
  0.805
Phatr33186
Predicted protein (248 aa)
     
 
  0.796
Phatr42276
Predicted protein (1263 aa)
 
 
        0.755
Phatr15848
Predicted protein (206 aa)
 
 
        0.750
Phatr11653
Predicted protein (174 aa)
     
   
  0.657
Phatr55067
Predicted protein (497 aa)
     
   
  0.632
Phatr42926
Predicted protein (439 aa)
     
   
  0.632
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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