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Phatr9706 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9706" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9706Predicted protein (169 aa)    
Predicted Functional Partners:
Phatr15848
Predicted protein (206 aa)
 
   
  0.805
Phatr47886
Predicted protein (528 aa)
       
      0.547
Phatr19982
Predicted protein (2347 aa)
       
      0.547
Phatr45898
Predicted protein (750 aa)
     
      0.512
Phatr12981
Predicted protein (462 aa)
     
      0.512
Phatr6258
Predicted protein (205 aa)
     
   
  0.477
Phatr49524
Predicted protein (926 aa)
       
      0.467
Phatr47389
Predicted protein (591 aa)
       
      0.467
Phatr55067
Predicted protein (497 aa)
     
   
  0.438
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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