STRINGSTRING
Phatr9724 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9724" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9724Predicted protein (371 aa)    
Predicted Functional Partners:
Phatr45980
Predicted protein (348 aa)
   
 
  0.949
Phatr34317
Dolichol phosphate glucosyltransferase (320 aa)
   
 
  0.949
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
   
 
  0.944
Phatr14444
Udp-n-acetylglucosamine n-acetylglucosaminyltransferase (180 aa)
     
  0.943
Phatr9427
Udp-n-acetylglucosamine transferase subunit alg13 (123 aa)
       
  0.942
Phatr48523
Predicted protein (551 aa)
         
    0.900
Phatr24772
Predicted protein (801 aa)
       
  0.754
Phatr9619
Predicted protein (408 aa)
   
 
  0.677
Phatr54168
Annotation not available (509 aa)
   
 
  0.677
Phatr14125
Monogalactosyldiacylglycerol synthase (394 aa)
   
 
  0.677
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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