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STRINGSTRING
Phatr9731 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9731" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9731Predicted protein; Belongs to the eukaryotic initiation factor 4E family (155 aa)    
Predicted Functional Partners:
Phatr47943
Predicted protein (1167 aa)
     
  0.958
Phatr44298
Predicted protein (1736 aa)
     
  0.958
Phatr44459
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (203 aa)
         
  0.940
Phatr9829
Predicted protein; Belongs to the eukaryotic initiation factor 4E family (181 aa)
         
0.824
Phatr49355
Predicted protein (549 aa)
     
 
  0.801
Phatr50048
Predicted protein (225 aa)
     
 
  0.734
Phatrdraft289
Predicted protein (144 aa)
     
   
  0.632
Phatr16603
Predicted protein (599 aa)
     
   
  0.622
Phatr10544
Predicted protein (496 aa)
 
            0.598
Phatr12868
Predicted protein (121 aa)
     
   
  0.592
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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