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STRINGSTRING
Phatr9794 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9794" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9794Predicted protein; Belongs to the membrane-bound acyltransferase family (404 aa)    
Predicted Functional Partners:
Phatr43773
Predicted protein (398 aa)
     
  0.988
Phatr43469
Predicted protein (320 aa)
     
  0.961
Phatr1971
Predicted protein (492 aa)
         
  0.951
Phatr14125
Monogalactosyldiacylglycerol synthase (394 aa)
         
  0.918
SQD2
Glycosyl transferase, group 1 (507 aa)
     
 
    0.916
Phatr14202
Diacylglycerol kinase (312 aa)
     
 
  0.915
Phatr20460
Predicted protein; Belongs to the membrane-bound acyltransferase family (499 aa)
           
  0.903
Phatr43856
Predicted protein (985 aa)
         
    0.900
Phatr45551
Predicted protein (535 aa)
     
   
  0.892
Phatr8860
annotation not available (577 aa)
       
 
  0.864
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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