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Phatr9832 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9832" - Protein-S-isoprenylcysteine O-methyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9832Protein-S-isoprenylcysteine O-methyltransferase (187 aa)    
Predicted Functional Partners:
Phatr28833
Predicted protein (464 aa)
     
  0.992
Phatr7108
Predicted protein (138 aa)
     
  0.992
Phatr45841
Predicted protein (331 aa)
     
   
  0.910
Phatr16932
Predicted protein (361 aa)
           
  0.899
Ras1
Predicted protein (191 aa)
     
 
  0.835
Phatr24362
Predicted protein (328 aa)
           
  0.797
Phatr48699
Predicted protein (217 aa)
 
            0.728
RFK
Riboflavin kinase (150 aa)
           
  0.669
Phatr12172
Predicted protein (153 aa)
           
  0.669
Phatr49325
Predicted protein; Belongs to the FPP/GGPP synthase family (343 aa)
           
  0.629
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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