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Phatr9893 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9893" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9893Predicted protein (455 aa)    
Predicted Functional Partners:
Phatr45828
Predicted protein (805 aa)
     
        0.958
Phatr25666
Predicted protein (885 aa)
     
  0.921
Phatr30585
Predicted protein (942 aa)
     
 
  0.916
Phatr32758
Predicted protein (483 aa)
   
 
0.900
Phatr43713
Predicted protein (609 aa)
     
 
  0.897
Phatr11894
Predicted protein (209 aa)
     
   
  0.893
Phatr10722
Predicted protein (153 aa)
   
 
0.891
PHATR_1682
Anthranilate synthase. anthranilate synthetase. chorismate lyase (439 aa)
     
 
  0.890
Phatr28984
Predicted protein (433 aa)
   
 
0.885
Phatr17974
Predicted protein (475 aa)
     
 
  0.882
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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