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STRINGSTRING
Phatr9904 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9904" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9904Predicted protein (276 aa)    
Predicted Functional Partners:
Phatr9697
Nascent polypeptide-associated complex subunit beta (153 aa)
     
        0.592
Phatr25714
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family (205 aa)
     
        0.585
Phatr23324
Predicted protein; Belongs to the universal ribosomal protein uL5 family (176 aa)
     
        0.547
Phatr17238
Anthranilate synthase (958 aa)
         
  0.523
Phatr44971
Predicted protein (124 aa)
     
        0.461
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.431
Phatr13382
Predicted protein (244 aa)
   
   
  0.424
Phatr43169
Predicted protein (404 aa)
           
  0.407
PMI1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family (351 aa)
   
   
  0.406
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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