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STRINGSTRING
Ras1 protein (Phaeodactylum tricornutum) - STRING interaction network
"Ras1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ras1Predicted protein (191 aa)    
Predicted Functional Partners:
Phatr21660
Serine/threonine-protein kinase TOR (2400 aa)
       
 
  0.946
Phatr9491
Predicted protein (163 aa)
     
 
  0.941
Phatr46058
Formin like protein (2015 aa)
     
 
  0.937
Phatr46730
Predicted protein (1807 aa)
       
 
  0.928
Phatr36721
Predicted protein (323 aa)
     
 
  0.915
Phatr18549
Predicted protein (1250 aa)
       
 
  0.888
Phatr44782
Kinase; Belongs to the inositol phosphokinase (IPK) family (450 aa)
     
 
  0.877
Phatr10539
Predicted protein; Belongs to the protein kinase superfamily (328 aa)
       
 
  0.875
Phatr36142
Predicted protein (320 aa)
     
 
  0.846
Phatr2845
Predicted protein; Belongs to the protein kinase superfamily (268 aa)
     
 
  0.846
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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