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Ras1 protein (Phaeodactylum tricornutum) - STRING interaction network
"Ras1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ras1Predicted protein (191 aa)    
Predicted Functional Partners:
Phatr47992
Predicted protein (432 aa)
     
  0.928
Phatr21897
G protein beta subunit (351 aa)
       
  0.877
Phatr46730
Predicted protein (1807 aa)
       
  0.858
Phatr9491
Predicted protein (163 aa)
       
  0.848
Phatr21660
Predicted protein (2400 aa)
       
  0.846
Phatr10539
Predicted protein (328 aa)
       
  0.794
Phatr36721
Predicted protein (323 aa)
       
  0.787
hCDK1
Predicted protein (380 aa)
       
  0.786
hCDK7
Predicted protein (358 aa)
       
  0.786
Phatr2845
Predicted protein (268 aa)
       
  0.765
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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