STRINGSTRING
Phatr9929 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9929" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9929Predicted protein (196 aa)    
Predicted Functional Partners:
Phatr13820
Predicted protein (282 aa)
     
  0.992
Phatr18258
Predicted protein (743 aa)
     
    0.988
Phatr45356
Predicted protein (479 aa)
     
      0.986
Phatr25666
Predicted protein (885 aa)
     
  0.986
Phatr44047
Predicted protein (463 aa)
     
    0.984
Phatr3351
Predicted protein (281 aa)
     
 
  0.984
Phatr19122
Predicted protein (322 aa)
     
 
  0.984
Phatr26035
Predicted protein (266 aa)
     
      0.984
Phatr17974
Predicted protein (475 aa)
     
  0.977
Phatr12394
Predicted protein (260 aa)
     
    0.976
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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