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Phatr9984 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9984" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9984Predicted protein (249 aa)    
Predicted Functional Partners:
Phatr16283
Predicted protein (249 aa)
 
  0.880
Phatr9634
Predicted protein (480 aa)
   
  0.845
Phatr33017
Predicted protein; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (711 aa)
   
 
  0.807
Phatr48932
Predicted protein (721 aa)
   
  0.804
Phatr47199
Predicted protein (323 aa)
   
 
  0.718
Phatr38985
Predicted protein (254 aa)
     
 
  0.710
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
   
 
  0.688
Phatr10100
Annotation not available (1250 aa)
   
 
  0.688
ZEP2
Precursor of protein zeaxanthin epoxidase-like protein (192 aa)
     
  0.680
ZEP1
Zeaxanthin epoxidase (565 aa)
     
  0.680
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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