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STRINGSTRING
Phatr9984 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr9984" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr9984Predicted protein (249 aa)    
Predicted Functional Partners:
Phatr12269
Predicted protein (300 aa)
 
 
  0.759
Phatr16283
Predicted protein (249 aa)
 
 
  0.715
Phatr12807
Predicted protein (326 aa)
   
 
  0.708
Phatr35064
Predicted protein (348 aa)
     
 
  0.707
Phatr9634
Predicted protein (480 aa)
     
 
  0.703
Phatr38985
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family (254 aa)
     
 
  0.688
Phatr33017
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX; Belongs to the Mg-chelatase subunits D/I family (711 aa)
   
   
  0.683
CHLH
Protoporphyrin IX magnesium chelatase, subunit H (1343 aa)
   
   
  0.675
Phatr47199
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (323 aa)
   
 
  0.637
PPO
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (520 aa)
     
   
  0.627
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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