Phatr9989 protein (Phaeodactylum tricornutum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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white nodes:
second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

Phatr9989

Predicted protein (620 aa)

Predicted Functional Partners:

Phatr14145

0.985

Phatr47058

0.985

Phatr28984

0.964

Phatr10722

0.963

Phatr25666

0.959

Phatr45828

0.958

BMS1

0.958

Phatr51897

0.958

Phatr15481

0.958

helicase_6

0.956

Your Current Organism:

Phaeodactylum tricornutum

NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMS1	Phatr10722	Phatr42831	Phatr10722	Ribosome biogenesis protein BMS1	Predicted protein	0.770
BMS1	Phatr14145	Phatr42831	Phatr14145	Ribosome biogenesis protein BMS1	Predicted protein	0.971
BMS1	Phatr15481	Phatr42831	Phatr15481	Ribosome biogenesis protein BMS1	Predicted protein	0.990
BMS1	Phatr25666	Phatr42831	Phatr25666	Ribosome biogenesis protein BMS1	Predicted protein	0.993
BMS1	Phatr28984	Phatr42831	Phatr28984	Ribosome biogenesis protein BMS1	Predicted protein	0.770
BMS1	Phatr45828	Phatr42831	Phatr45828	Ribosome biogenesis protein BMS1	Predicted protein	0.958
BMS1	Phatr47058	Phatr42831	Phatr47058	Ribosome biogenesis protein BMS1	Predicted protein	0.958
BMS1	Phatr51897	Phatr42831	Phatr51897	Ribosome biogenesis protein BMS1	Predicted protein	0.985
BMS1	Phatr9989	Phatr42831	Phatr9989	Ribosome biogenesis protein BMS1	Predicted protein	0.958
BMS1	helicase_6	Phatr42831	Phatr26853	Ribosome biogenesis protein BMS1	Predicted protein	0.958
Phatr10722	BMS1	Phatr10722	Phatr42831	Predicted protein	Ribosome biogenesis protein BMS1	0.770
Phatr10722	Phatr14145	Phatr10722	Phatr14145	Predicted protein	Predicted protein	0.877
Phatr10722	Phatr15481	Phatr10722	Phatr15481	Predicted protein	Predicted protein	0.971
Phatr10722	Phatr25666	Phatr10722	Phatr25666	Predicted protein	Predicted protein	0.823
Phatr10722	Phatr45828	Phatr10722	Phatr45828	Predicted protein	Predicted protein	0.958
Phatr10722	Phatr47058	Phatr10722	Phatr47058	Predicted protein	Predicted protein	0.797
Phatr10722	Phatr51897	Phatr10722	Phatr51897	Predicted protein	Predicted protein	0.958
Phatr10722	Phatr9989	Phatr10722	Phatr9989	Predicted protein	Predicted protein	0.963
Phatr10722	helicase_6	Phatr10722	Phatr26853	Predicted protein	Predicted protein	0.859
Phatr14145	BMS1	Phatr14145	Phatr42831	Predicted protein	Ribosome biogenesis protein BMS1	0.971

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