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STRINGSTRING
Phatrdraft1000 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1000" - PhospholipasePredicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1000PhospholipasePredicted protein (889 aa)    
Predicted Functional Partners:
Phatr12431
Predicted protein (801 aa)
       
 
  0.629
Phatr44782
Kinase; Belongs to the inositol phosphokinase (IPK) family (450 aa)
     
 
  0.535
Phatr38549
Predicted protein (1128 aa)
     
   
  0.413
Phatr36270
Predicted protein (1987 aa)
     
   
  0.413
Phatr46058
Formin like protein (2015 aa)
           
  0.402
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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