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STRINGSTRING
Phatrdraft1025 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1025" - Tocopherol cyclase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1025Tocopherol cyclase (515 aa)    
Predicted Functional Partners:
Phatr37858
Predicted protein (398 aa)
   
 
  0.992
Phatr33530
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family (392 aa)
     
 
  0.926
TMT
Tocopherol o-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family (318 aa)
     
 
  0.926
Phatr2738
Predicted protein (235 aa)
   
   
  0.868
Phatr34441
Predicted protein (286 aa)
           
  0.798
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
     
   
  0.726
Phatr47199
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (323 aa)
     
   
  0.646
Phatr20833
Predicted protein (211 aa)
     
   
  0.646
VDE
Violaxanthin deepoxidase (262 aa)
     
   
  0.602
gshB
Glutathione synthase. glutathione synthetase. GSH synthetase (567 aa)
           
  0.582
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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