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STRINGSTRING
Phatrdraft1192 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1192" - annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1192annotation not available (457 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.981
Phatr14792
Phosphoglycerate kinase (432 aa)
 
 
  0.818
PGK
Phosphoglycerate kinase (448 aa)
 
 
  0.809
Phatr29157
Phosphoglycerate kinase (441 aa)
 
 
  0.806
Phatr26176
Predicted protein (408 aa)
     
   
  0.785
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
 
 
  0.769
FbaC5
Fructose-bisphosphate aldolase (358 aa)
     
 
  0.749
TIM_1
Triosephosphate isomerase (268 aa)
 
 
  0.729
Phatr50738
Triosephosphate isomerase (290 aa)
   
 
  0.675
Phatr18228
Triosephosphate isomerase (298 aa)
   
 
  0.675
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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