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Phatrdraft1315 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1315" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1315Predicted protein (496 aa)    
Predicted Functional Partners:
Phatr17772
Predicted protein (1313 aa)
     
 
  0.643
Phatr25204
Predicted protein (598 aa)
       
  0.591
Phatr51720
Fumarate reductase flavoprotein (668 aa)
   
 
  0.549
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.522
Phatr24739
Predicted protein (1594 aa)
   
   
  0.522
ACL
Atp-citrate synthase (1082 aa)
     
   
  0.520
Phatr26515
Predicted protein (272 aa)
     
 
  0.514
petC
Cytochrome b6-f complex iron-sulfur subunit (217 aa)
     
 
  0.497
Phatr13358
Cytochrome b6-f complex iron-sulfur subunit (178 aa)
     
 
  0.497
Phatr12233
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (179 aa)
     
 
  0.497
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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