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Phatrdraft1331 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1331" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1331Predicted protein (548 aa)    
Predicted Functional Partners:
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
   
   
  0.613
Phatr18027
Predicted protein (706 aa)
   
   
  0.613
Phatr11799
Predicted protein (84 aa)
   
 
  0.570
Phatr14713
Predicted protein (137 aa)
 
 
  0.559
Phatr12985
Predicted protein (132 aa)
   
 
  0.516
Phatr10835
Predicted protein; Translation initiation factor IF-2 (579 aa)
 
 
  0.515
GluRS_2
Glutamyl-trna synthase; Belongs to the class-I aminoacyl-tRNA synthetase family (588 aa)
 
   
  0.505
Phatr22622
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one- codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. LepA subfamily (693 aa)
   
   
  0.501
Phatr23324
Predicted protein; Belongs to the universal ribosomal protein uL5 family (176 aa)
     
 
  0.497
Phatr8720
Predicted protein; Belongs to the bacterial ribosomal protein bL17 family (116 aa)
     
 
  0.469
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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