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STRINGSTRING
Phatrdraft137 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft137" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft137Predicted protein (245 aa)    
Predicted Functional Partners:
hCDK7
Mitogen-activated protein kinase (358 aa)
   
 
 
  0.612
Phatr9491
Predicted protein (163 aa)
   
 
  0.580
Phatr9200
Predicted protein (274 aa)
   
   
  0.458
Phatrdraft165
Predicted protein (222 aa)
   
     
  0.457
Phatrdraft152
Predicted protein (222 aa)
   
     
  0.457
Phatr42850
Predicted protein (464 aa)
   
      0.454
CDKC1
Predicted protein; Belongs to the protein kinase superfamily (355 aa)
   
      0.450
Phatr8934
Predicted protein; Belongs to the protein kinase superfamily (265 aa)
   
      0.448
Phatr2607
Predicted protein; Belongs to the protein kinase superfamily (370 aa)
   
      0.445
Phatr13897
Predicted protein (108 aa)
   
      0.442
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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