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Phatrdraft1384 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1384" - SURF1-like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1384SURF1-like protein; Probably involved in the biogenesis of the COX complex (343 aa)    
Predicted Functional Partners:
Phatr21354
Predicted protein (422 aa)
   
 
  0.977
Phatr32550
Predicted protein (393 aa)
   
 
  0.955
Phatr16147
Predicted protein (200 aa)
   
 
  0.949
Phatr14770
Predicted protein (171 aa)
   
   
  0.941
Phatr26515
Predicted protein (272 aa)
     
 
  0.906
Phatr11016
Predicted protein (91 aa)
     
   
  0.885
Phatr15417
Predicted protein (83 aa)
           
  0.857
Phatr20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)
     
   
  0.827
Phatr20787
Predicted protein; Belongs to the peptidase M16 family (473 aa)
   
 
  0.808
Phatr50559
Predicted protein (390 aa)
     
   
  0.805
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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