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STRINGSTRING
Phatrdraft1431 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1431" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1431Predicted protein (1090 aa)    
Predicted Functional Partners:
Phatr15125
Predicted protein (311 aa)
   
   
  0.911
GMD1
Gdp-mannose 4,6-dehydratase (363 aa)
         
  0.864
Phatr30786
Xylose isomerase (445 aa)
         
    0.800
Phatr45657
Predicted protein (689 aa)
           
  0.648
Phatr48865
Predicted protein (500 aa)
           
  0.582
Phatr39282
Predicted protein (492 aa)
           
  0.582
Phatr38686
Predicted protein (386 aa)
           
  0.582
Phatr29821
Predicted protein (473 aa)
           
  0.582
Phatr19901
Predicted protein (900 aa)
         
  0.526
Phatr46656
Predicted protein (531 aa)
   
   
  0.514
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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