• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatrdraft1549 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1549" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1549Predicted protein (314 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
   
  0.653
Phatr46706
Predicted protein (335 aa)
         
  0.495
Phatr34610
N-acetylglucosaminyl phosphatidylinositol deacetylase (267 aa)
         
  0.474
Phatr31147
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) (559 aa)
         
  0.425
GLXI
Lactyolglutathione lyase (310 aa)
         
  0.422
Phatr36256
Probable acetate kinase (401 aa)
           
  0.412
Phatr21296
Biotin synthase (437 aa)
           
  0.412
Phatr41746
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family (345 aa)
           
  0.408
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (8%) [HD]