Full Link:
STRINGSTRING
Phatrdraft1610 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1610" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1610Predicted protein (279 aa)    
Predicted Functional Partners:
Phatr43018
Predicted protein (509 aa)
       
  0.905
IscU
Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
   
  0.877
IscS
Precursor of desulfurase cysteine desulfurase IscS (400 aa)
   
  0.824
CsdB
Selenocysteine lyase (386 aa)
   
  0.824
Phatr14867
Predicted protein (88 aa)
   
 
  0.776
Phatr11154
Predicted protein (105 aa)
   
 
  0.776
Phatr7780
Predicted protein (122 aa)
   
 
  0.774
GltD
Synthase of glutamate synthase (580 aa)
       
  0.765
Phatr7755
Predicted protein (88 aa)
       
 
  0.698
Phatr43649
Predicted protein (775 aa)
       
 
  0.698
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (6%) [HD]