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Phatrdraft1611 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1611" - PhospholipasePredicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1611PhospholipasePredicted protein (889 aa)    
Predicted Functional Partners:
Phatr49524
Predicted protein (926 aa)
     
  0.963
Phatr7164
Predicted protein (170 aa)
         
  0.930
Phatr21501
Predicted protein (175 aa)
         
  0.930
Phatr17109
Predicted protein (172 aa)
         
  0.930
Phatr16364
Predicted protein (288 aa)
         
  0.930
Phatr30282
Predicted protein (341 aa)
       
  0.913
Phatr14202
Predicted protein (312 aa)
     
 
  0.907
Phatr573
Predicted protein (665 aa)
       
  0.906
Phatr18323
Predicted protein (288 aa)
         
  0.901
Phatr44782
Predicted protein (450 aa)
         
    0.900
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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