STRINGSTRING
Phatrdraft1621 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1621" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1621Predicted protein (431 aa)    
Predicted Functional Partners:
Phatr46780
Predicted protein (436 aa)
        
 
  0.600
Phatr23557
Predicted protein (395 aa)
     
 
  0.432
Phatr13994
Predicted protein (336 aa)
   
   
  0.428
Phatr6528
Predicted protein (125 aa)
            
  0.426
ZIP1
Iron permease 1 (265 aa)
            
  0.426
Phatr49400
Predicted protein (334 aa)
            
  0.426
Phatr38445
Predicted protein (390 aa)
            
  0.426
Phatr26405
Predicted protein (188 aa)
            
  0.426
Phatr22166
Predicted protein (280 aa)
            
  0.426
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >