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STRINGSTRING
Phatrdraft1635 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1635" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1635Predicted protein (693 aa)    
Predicted Functional Partners:
Phatr11563
Predicted protein (238 aa)
 
 
  0.669
Phatr10848
Predicted protein (261 aa)
 
 
  0.658
Phatr5235
Predicted protein (263 aa)
 
 
  0.648
Phatr3120
Predicted protein (241 aa)
 
 
  0.639
Phatr9413
Predicted protein; Belongs to the protein kinase superfamily (325 aa)
     
 
  0.634
Phatr3730
Predicted protein; Belongs to the protein kinase superfamily (300 aa)
     
 
  0.634
Phatr11631
Predicted protein (300 aa)
   
 
  0.627
Phatr10865
Predicted protein; Belongs to the protein kinase superfamily (323 aa)
   
 
  0.627
Phatr43378
Predicted protein (1934 aa)
     
 
  0.611
Phatr50058
Predicted protein (1312 aa)
       
      0.591
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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