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STRINGSTRING
Phatrdraft165 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft165" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft165Predicted protein (222 aa)    
Predicted Functional Partners:
Phatr34538
Predicted protein (320 aa)
     
  0.933
Phatr44445
Predicted protein (1163 aa)
     
0.851
Phatr11633
Predicted protein (312 aa)
       
 
  0.613
Phatr16032
Predicted protein; Belongs to the protein kinase superfamily (422 aa)
   
   
  0.591
Phatr27838
Predicted protein (1040 aa)
     
   
  0.543
Phatr13897
Predicted protein (108 aa)
   
 
      0.476
Phatr4563
Predicted protein; Belongs to the protein kinase superfamily (275 aa)
   
     
  0.460
Phatrdraft434
Predicted protein (245 aa)
   
     
  0.457
Phatrdraft137
Predicted protein (245 aa)
   
     
  0.457
Phatr8866
Predicted protein (229 aa)
   
     
  0.453
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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