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STRINGSTRING
Phatrdraft1682 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1682" - Anthranilate synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1682Anthranilate synthase (927 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
 
 
  0.933
Phatr43429
Chorismate synthase (442 aa)
   
 
  0.871
Phatrdraft417
Probable chorismate mutase (288 aa)
   
 
  0.870
Phatr43277
Probable chorismate mutase (299 aa)
   
 
  0.870
Phatr21868
Predicted protein (186 aa)
   
   
  0.692
Phatr17238
Anthranilate synthase (958 aa)
   
 
0.685
Phatr1690
Predicted protein (495 aa)
         
  0.627
Phatr12107
Predicted protein (460 aa)
         
  0.625
Phatr11527
Predicted protein (172 aa)
 
 
  0.534
Phatr28937
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
 
   
  0.530
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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