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STRINGSTRING
Phatrdraft176 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft176" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft176Predicted protein (218 aa)    
Predicted Functional Partners:
Phatr20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)
     
   
  0.879
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
           
  0.796
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
     
   
  0.669
Phatr18202
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family (882 aa)
           
  0.632
Phatr12431
Predicted protein (801 aa)
           
  0.621
Phatr9115
Predicted protein (240 aa)
           
  0.582
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
           
  0.582
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
           
  0.582
Phatr4283
Predicted protein (201 aa)
           
  0.570
Phatr41170
Predicted protein (531 aa)
           
  0.570
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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