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Phatrdraft18 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft18" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft18Predicted protein (584 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
   
   
  0.654
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
       
 
  0.624
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
       
 
  0.624
Phatr42282
Predicted protein (383 aa)
   
   
  0.515
Phatr25956
Predicted protein (272 aa)
     
   
  0.475
Phatr49253
Predicted protein (566 aa)
   
   
  0.446
Phatr12894
Predicted protein (403 aa)
   
   
  0.424
Phatr51305
Predicted protein; Reversible hydration of carbon dioxide (282 aa)
   
   
  0.416
Phatr45443
Predicted protein; Reversible hydration of carbon dioxide (273 aa)
   
   
  0.416
Phatr47306
Predicted protein (193 aa)
         
  0.409
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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