• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatrdraft1812 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft1812" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft1812Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. TrmE GTPase family (609 aa)    
Predicted Functional Partners:
Phatr19579
Predicted protein (843 aa)
 
  0.857
Phatr42548
Predicted protein (346 aa)
   
   
  0.637
Phatr50302
Predicted protein (249 aa)
 
 
   
  0.614
Phatr51120
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (777 aa)
 
   
  0.585
Phatr1719
Predicted protein (415 aa)
     
   
  0.579
Phatr3425
Predicted protein (394 aa)
   
 
  0.519
Phatr15294
Predicted protein (368 aa)
   
 
  0.519
Phatr9509
Predicted protein (404 aa)
   
 
  0.438
Phatr50271
Predicted protein (421 aa)
   
 
  0.438
Phatr43106
Predicted protein (520 aa)
   
 
  0.438
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (7%) [HD]