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Phatrdraft218 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft218" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft218Predicted protein (125 aa)    
Predicted Functional Partners:
Phatr44351
Predicted protein (510 aa)
     
  0.833
Phatr3171
Predicted protein (220 aa)
     
  0.830
Hsp70_1
Predicted protein (673 aa)
     
  0.812
Phatr44606
Predicted protein (130 aa)
     
  0.805
Phatr8096
Predicted protein (67 aa)
     
  0.758
Phatr8363
Predicted protein (84 aa)
     
  0.697
Phatr15032
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (157 aa)
     
  0.697
Phatr12188
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (100 aa)
     
  0.697
Phatr22027
Predicted protein (92 aa)
       
  0.686
Phatr15689
Predicted protein (441 aa)
     
  0.657
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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