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STRINGSTRING
Phatrdraft218 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft218" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft218Predicted protein (125 aa)    
Predicted Functional Partners:
Phatr35810
Predicted protein (202 aa)
     
 
  0.978
Phatr48010
Predicted protein (411 aa)
     
 
  0.955
Phatr3171
Predicted protein (220 aa)
     
 
  0.951
Phatr44351
Predicted protein (510 aa)
     
 
  0.945
Phatr44606
Predicted protein (130 aa)
     
 
  0.941
Phatr8096
Predicted protein (67 aa)
     
 
  0.934
Phatr42559
Predicted protein (245 aa)
     
 
  0.932
Phatr8363
Predicted protein (84 aa)
     
 
  0.929
Phatr22027
Predicted protein; Belongs to the small Tim family (92 aa)
     
 
  0.917
Phatr47492
Predicted protein (640 aa)
     
 
  0.912
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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