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STRINGSTRING
Phatrdraft224 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft224" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft224Predicted protein (166 aa)    
Predicted Functional Partners:
Phatr46169
Predicted protein (520 aa)
     
 
  0.994
Phatr19982
Predicted protein (2347 aa)
     
 
  0.987
Phatr45319
Predicted protein (1013 aa)
     
 
  0.975
Phatr35063
Predicted protein (165 aa)
     
 
  0.965
Phatr16704
Predicted protein (1045 aa)
     
 
  0.960
Phatr50130
Predicted protein (260 aa)
     
 
  0.958
Phatr43349
Predicted protein (651 aa)
     
 
  0.952
Phatr51232
Predicted protein (110 aa)
     
 
  0.948
Phatr34712
Predicted protein (662 aa)
     
 
  0.948
Phatr10494
Predicted protein (98 aa)
     
 
  0.947
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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