STRINGSTRING
Phatrdraft224 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft224" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft224Predicted protein (166 aa)    
Predicted Functional Partners:
Phatr46169
Predicted protein (520 aa)
     
 
  0.986
Phatr45533
Predicted protein (418 aa)
     
 
  0.815
CK2_1
Predicted protein (341 aa)
     
      0.803
Phatr4216
Predicted protein (350 aa)
     
      0.803
Phatr14627
Predicted protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (188 aa)
       
      0.649
Phatr12614
Predicted protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (196 aa)
       
      0.649
CK2_2
Predicted protein; Plays a complex role in regulating the basal catalytic activity of the alpha subunit (204 aa)
       
      0.649
Phatr23164
Predicted protein (489 aa)
     
  0.642
Phatrdraft1638
Predicted protein (548 aa)
     
 
  0.596
Phatr45898
Predicted protein (750 aa)
         
  0.571
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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