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STRINGSTRING
Phatrdraft251 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft251" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft251Predicted protein (168 aa)    
Predicted Functional Partners:
Phatr46568
Predicted protein; Belongs to the AAA ATPase family (821 aa)
   
   
  0.485
Phatr9090
Predicted protein; Belongs to the AAA ATPase family (431 aa)
 
 
  0.484
Phatr13383
Predicted protein; Belongs to the AAA ATPase family (164 aa)
 
        0.455
Phatr42768
Predicted protein (599 aa)
   
        0.453
Phatr12252
Predicted protein; Belongs to the AAA ATPase family (131 aa)
   
        0.451
Phatr28412
Predicted protein; Belongs to the AAA ATPase family (277 aa)
 
        0.442
Phatr45690
Predicted protein (1015 aa)
     
   
  0.402
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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