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STRINGSTRING
Phatrdraft252 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft252" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft252Predicted protein (90 aa)    
Predicted Functional Partners:
Phatr44189
Predicted protein (1560 aa)
   
   
  0.915
Phatr50387
Predicted protein (393 aa)
           
  0.708
Phatr24978
Predicted protein (506 aa)
     
   
  0.582
PTD9
Desaturase delta 9 desaturase; Belongs to the fatty acid desaturase type 1 family (333 aa)
       
 
  0.582
Phatr48947
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (343 aa)
     
 
  0.501
AOX1
Precursor of oxidase acyl-coa oxidase; Belongs to the acyl-CoA oxidase family (706 aa)
   
 
  0.476
Phatr12431
Predicted protein (801 aa)
     
 
  0.473
DEI1
Delta-3,5-delta-2,4-dienoyl-CoA isomerase (291 aa)
     
 
  0.469
Phatr36555
Predicted protein (192 aa)
   
 
      0.436
Phatr30667
Predicted protein; Belongs to the BolA/IbaG family (90 aa)
     
   
  0.424
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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