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STRINGSTRING
Phatrdraft278 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft278" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft278Predicted protein (77 aa)    
Predicted Functional Partners:
IscU
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
   
 
  0.746
Phatr45164
Predicted protein (657 aa)
         
  0.664
Phatr38642
Predicted protein (587 aa)
     
   
  0.619
Phatr30667
Predicted protein; Belongs to the BolA/IbaG family (90 aa)
     
 
  0.613
Phatr45826
Predicted protein (238 aa)
     
 
  0.609
Phatr14927
Predicted protein (87 aa)
     
   
  0.602
Phatr31367
Predicted protein (819 aa)
     
   
  0.591
Phatr14867
Predicted protein (88 aa)
   
 
  0.525
Phatr11154
Predicted protein (105 aa)
   
 
  0.525
Phatr7780
Predicted protein (122 aa)
   
 
  0.524
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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