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STRINGSTRING
Phatrdraft371 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft371" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft371Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family (308 aa)    
Predicted Functional Partners:
Phatr44189
Predicted protein (1560 aa)
     
   
  0.791
Phatr23913
Acetyl-coa c-acetyltransferase; Belongs to the thiolase family (396 aa)
   
 
  0.780
Phatr45947
Predicted protein; Belongs to the thiolase family (403 aa)
   
 
  0.748
KCT3
Beta-ketoacyl-CoA thiolase; Belongs to the thiolase family (457 aa)
   
 
  0.713
Phatr22019
Predicted protein (437 aa)
   
 
  0.704
Phatr44982
Predicted protein (203 aa)
   
   
  0.701
Phatr54528
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family (385 aa)
     
   
  0.684
AOX1
Precursor of oxidase acyl-coa oxidase; Belongs to the acyl-CoA oxidase family (706 aa)
   
 
  0.673
Phatr46146
Predicted protein (568 aa)
   
 
  0.670
HAD2
3-hydroxyacyl-coenzyme A dehydrogenase (329 aa)
 
   
  0.627
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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