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STRINGSTRING
Phatrdraft383 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft383" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft383Predicted protein (346 aa)    
Predicted Functional Partners:
Phatr28433
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (167 aa)
     
 
  0.688
Phatr46292
Predicted protein (772 aa)
     
 
  0.662
UBI3
Ubiquitin extension protein 3 (155 aa)
     
 
  0.620
Phatr31584
Predicted protein; Belongs to the peptidase C19 family (618 aa)
     
 
  0.601
Phatr15555
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1706 aa)
     
 
  0.597
sUbi
Ubiquitin-like protein (268 aa)
     
 
  0.583
hUbi
Predicted proteinUbiquitin extension protein 4 (381 aa)
     
 
  0.583
Phatr49037
Predicted protein (205 aa)
     
 
  0.583
UBC1
Ubiquitin-conjugating enzyme 1; Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family (197 aa)
     
 
  0.557
Phatr48146
Predicted protein (1348 aa)
     
 
  0.536
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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