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STRINGSTRING
Phatrdraft391 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatrdraft391" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatrdraft391Predicted protein (749 aa)    
Predicted Functional Partners:
Phatr32902
Predicted protein (238 aa)
   
 
  0.528
Phatr15852
Predicted protein (138 aa)
       
 
  0.454
Phatr23557
Predicted protein (395 aa)
   
   
  0.429
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
     
   
  0.429
Phatr14770
Predicted protein (171 aa)
         
  0.408
Phatr16147
Predicted protein (200 aa)
     
   
  0.404
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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